Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9H5_PETMAYY1 associated factor 2. (195 aa)    
Predicted Functional Partners:
S4R4L4_PETMA
Mbt domain containing 1.
    
 0.980
S4RQ11_PETMA
Bmi1 polycomb ring finger oncogene 1b.
    
 0.965
S4RX93_PETMA
Polycomb group ring finger 5b.
    
 0.965
S4RR64_PETMA
Uncharacterized protein.
    
 
 0.926
S4RQZ4_PETMA
DUF4801 domain-containing protein.
    
 0.922
S4R6M0_PETMA
Polycomb group ring finger 1.
    
 0.909
S4RSJ7_PETMA
Polycomb group ring finger 6.
    
 0.909
PCGF3
Polycomb group ring finger 3.
    
 0.887
PCGF3-2
Polycomb group ring finger 3.
    
 0.887
DCAF7
Ddb1 and cul4 associated factor 7.
   
 
 0.845
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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