Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R9H6_PETMANuclear receptor domain-containing protein. (57 aa)    
Predicted Functional Partners:
S4R848_PETMA
Uncharacterized protein.
    
  0.503
S4RJD3_PETMA
E1A binding protein p300 a.
    
 0.465
S4RM71_PETMA
Uncharacterized protein.
    
 0.465
S4RS76_PETMA
RNA binding motif protein 22.
    
  0.454
S4R8R9_PETMA
NR LBD domain-containing protein.
    
 0.453
S4RB56_PETMA
Nuclear receptor domain-containing protein.
    
 0.453
S4RCT5_PETMA
Ribosomal protein L9.
    
  0.452
S4RS26_PETMA
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.452
S4R6P0_PETMA
Uncharacterized protein.
    
  0.430
S4R6P2_PETMA
SANT domain-containing protein.
    
  0.430
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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