Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9H7_PETMAUncharacterized protein. (108 aa)    
Predicted Functional Partners:
S4RFL5_PETMA
Uncharacterized protein.
 
     0.940
S4RXM3_PETMA
Uncharacterized protein.
 
     0.936
S4RDS6_PETMA
Ubiquitin-conjugating enzyme E2L 3a; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.906
S4RL39_PETMA
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.901
S4R550_PETMA
Zgc:77849.
    
 
 0.872
S4REI6_PETMA
Phosphorylated adaptor for RNA export.
    
   0.871
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.857
S4RIG4_PETMA
HECT domain-containing protein.
 
  
 0.853
S4RTM7_PETMA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.848
UBB
Ubiquitin B.
    
 0.831
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (12%) [HD]