STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9I4_PETMATSR2 ribosome maturation factor. (200 aa)    
Predicted Functional Partners:
S4R6N4_PETMA
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.977
S4RIA6_PETMA
Neuroguidin, EIF4E binding protein.
   
  
 0.925
S4RPR3_PETMA
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.898
S4RS71_PETMA
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.894
TSR1
TSR1 ribosome maturation factor.
   
 
 0.885
S4RQR4_PETMA
LTV1 ribosome biogenesis factor.
   
 
 0.852
S4RGY9_PETMA
Brix domain containing 2.
   
   0.850
S4RDD2_PETMA
RRM domain-containing protein.
   
    0.849
S4R7L5_PETMA
GN3L_Grn1 domain-containing protein.
   
  
 0.844
S4R7A6_PETMA
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.824
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.