Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9I5_PETMAUncharacterized protein. (501 aa)    
Predicted Functional Partners:
S4RLD8_PETMA
Aminoadipate-semialdehyde dehydrogenase.
  
 0.694
S4RJ32_PETMA
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.648
S4RN24_PETMA
Uncharacterized protein.
  
 0.646
S4R6B4_PETMA
Uncharacterized protein.
  
 0.640
S4RZ01_PETMA
Uncharacterized protein.
    
 0.628
S4RG41_PETMA
FHA domain-containing protein.
    
 0.570
S4R5M7_PETMA
Coiled-coil domain containing 57.
  
 0.553
S4R5V2_PETMA
Uncharacterized protein.
  
 0.553
S4R5H8_PETMA
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
   
 0.544
S4RG43_PETMA
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.539
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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