Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9I6_PETMA4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)    
Predicted Functional Partners:
S4RUP2_PETMA
Aldedh domain-containing protein.
  
 0.996
S4REM5_PETMA
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.986
S4RP43_PETMA
Uncharacterized protein.
  
 0.986
S4RQ78_PETMA
3-hydroxyisobutyrate dehydrogenase b.
     
 0.980
S4RHA8_PETMA
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.977
S4R4D6_PETMA
Aldehyde dehydrogenase 6 family, member A1.
   
 
 0.970
S4RSE2_PETMA
Ureidopropionase, beta.
  
 
 0.970
S4RZL9_PETMA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.970
S4RNI4_PETMA
Carnosine dipeptidase 2.
   
 0.959
S4RXJ5_PETMA
Uncharacterized protein.
   
 0.959
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (14%) [HD]