STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9I9_PETMALin-37 DREAM MuvB core complex component. (245 aa)    
Predicted Functional Partners:
S4RF08_PETMA
Lin-52 DREAM MuvB core complex component.
    
 0.994
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
    
 0.993
S4RDE2_PETMA
Helicase ATP-binding domain-containing protein.
    
 0.988
S4REK3_PETMA
Helicase ATP-binding domain-containing protein.
    
 0.988
FANCM
Uncharacterized protein.
    
 0.988
S4RAF0_PETMA
Lin-54 DREAM MuvB core complex component.
    
 0.985
S4R4K5_PETMA
V-myb avian myeloblastosis viral oncogene homolog.
   
 0.967
S4R9E1_PETMA
V-myb avian myeloblastosis viral oncogene homolog-like 1.
   
 0.967
S4RN58_PETMA
Retinoblastoma-like 1 (p107).
    
 0.946
S4RWU1_PETMA
Replication protein A2.
   
 0.895
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.