Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9J1_PETMAPolycystic kidney disease 2-like 1. (771 aa)    
Predicted Functional Partners:
S4RPY8_PETMA
PLAT domain-containing protein.
  
 
0.753
S4R658_PETMA
Uncharacterized protein.
    
 0.716
S4RL40_PETMA
Exocyst complex component 5.
     
 0.620
S4R6T6_PETMA
Uncharacterized protein.
    
 
 0.525
S4RF66_PETMA
Intraflagellar transport 20 homolog (Chlamydomonas).
   
  
 0.524
S4RMU7_PETMA
Exocyst complex component 3.
    
 0.521
S4RX27_PETMA
Exocyst complex component 4.
     
 0.509
S4RYH1_PETMA
RAB11B, member RAS oncogene family, a.
     
  0.501
S4RSP8_PETMA
Exocyst complex component 8.
     
  0.492
S4RWG8_PETMA
Nephronophthisis 1.
    
 
 0.479
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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