STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTO1Mitochondrial tRNA translation optimization 1. (663 aa)    
Predicted Functional Partners:
S4R726_PETMA
GTP binding protein 3, mitochondrial.
 
 0.990
S4RHQ9_PETMA
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.899
S4RDJ4_PETMA
DAO domain-containing protein.
     
 0.658
S4RMI7_PETMA
D-amino-acid oxidase, tandem duplicate 2.
     
 0.658
S4RS55_PETMA
Zgc:172341.
     
 0.658
S4RY68_PETMA
Cardiolipin synthase 1.
    
 0.658
S4RTM3_PETMA
tRNA-binding domain-containing protein.
     
 0.653
S4RU27_PETMA
Cysteinyl-tRNA synthetase 2, mitochondrial.
  
  
 0.653
S4RUT4_PETMA
Fe2OG dioxygenase domain-containing protein.
 
 
    0.645
S4RNG4_PETMA
Uncharacterized protein.
  
  
 0.579
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.