Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
S4R9J9_PETMAUncharacterized protein; Belongs to the peptidase M18 family. (260 aa)    
Predicted Functional Partners:
S4RFJ3_PETMA
Uncharacterized protein; Belongs to the peptidase M18 family.
 
     0.951
S4RDH1_PETMA
Nardilysin b (N-arginine dibasic convertase).
      
 0.803
S4RHC0_PETMA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.753
SIDT1
SID1 transmembrane family member 1.
      
 0.667
S4RTC7_PETMA
Uncharacterized protein.
   
 
 0.655
S4REV6_PETMA
Non-SMC condensin II complex, subunit H2.
      
 0.650
S4RGH2_PETMA
GABA(A) receptor-associated protein like 2.
   
 
 0.649
CYTH2
Cytohesin 2.
      
 0.641
ANPEP
Aminopeptidase.
      
 0.639
S4RV21_PETMA
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
      
 0.626
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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