Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9K1_PETMAUncharacterized protein. (512 aa)    
Predicted Functional Partners:
S4RFN8_PETMA
ANF_receptor domain-containing protein.
    
 0.967
S4RH95_PETMA
Protein interacting with prkca 1.
    
 0.816
S4RFW7_PETMA
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.736
S4RQ81_PETMA
ANF_receptor domain-containing protein.
    
 0.664
S4RRB9_PETMA
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.664
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.664
S4RZW3_PETMA
Glutamate receptor, ionotropic, AMPA 1b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.664
S4R9N4_PETMA
Uncharacterized protein.
    
 
 0.635
S4RBJ2_PETMA
Uncharacterized protein.
    
 
 0.635
S4RBS5_PETMA
Uncharacterized protein.
    
 
 0.635
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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