Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9K5_PETMASynaptobrevin-like 1; Belongs to the synaptobrevin family. (168 aa)    
Predicted Functional Partners:
S4R5Z2_PETMA
Syntaxin 1A (brain).
    
 0.998
S4RUR1_PETMA
Synaptosome associated protein 29.
    
 0.996
S4RTR2_PETMA
t-SNARE coiled-coil homology domain-containing protein.
   
 0.992
S4RTL6_PETMA
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.990
S4RLC4_PETMA
Syntaxin 17.
    
 0.989
S4RBN3_PETMA
Syntaxin 11b, tandem duplicate 2; Belongs to the syntaxin family.
    
 0.980
S4R627_PETMA
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.976
S4RX35_PETMA
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.976
S4R478_PETMA
Si:ch211-208k15.1; Belongs to the syntaxin family.
   
 0.972
S4REN5_PETMA
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.971
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.