Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9K8_PETMAUncharacterized protein. (127 aa)    
Predicted Functional Partners:
S4RWU8_PETMA
Rho-GAP domain-containing protein.
 
  
 0.927
S4RNJ5_PETMA
Chimerin 1.
 
      0.900
S4RFK4_PETMA
Uncharacterized protein.
 
      0.736
S4RF79_PETMA
Uncharacterized protein.
    
 0.530
S4RQ50_PETMA
Rac family small GTPase 2.
    
 0.530
RHOU
Ras homolog family member U.
    
 0.530
S4RX54_PETMA
Rac family small GTPase 1.
    
 0.530
RHOU-2
Ras homolog family member U.
    
 0.530
RHOU-3
Ras homolog family member U.
    
 0.530
S4R8X0_PETMA
Uncharacterized protein.
   
 0.488
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.