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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9L8_PETMAUncharacterized protein. (1995 aa)    
Predicted Functional Partners:
S4REX2_PETMA
Annexin.
   
 0.856
S4RWB7_PETMA
Uncharacterized protein.
    
 0.810
S4RJB4_PETMA
MRG domain-containing protein.
    
 0.791
ENSPMAP00000003709
annotation not available
   
 0.758
S4RK02_PETMA
Uncharacterized protein.
   
 0.750
S4RLW1_PETMA
Ig-like domain-containing protein.
   
 0.750
S4RRQ1_PETMA
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.734
S4RYK6_PETMA
Ncstrn_small domain-containing protein.
    
 0.733
S4RAK4_PETMA
Presenilin enhancer, gamma-secretase subunit.
    
 0.707
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.679
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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