STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9M4_PETMAAspartate aminotransferase. (429 aa)    
Predicted Functional Partners:
S4RJ25_PETMA
Malate dehydrogenase.
   
 0.988
S4RAL7_PETMA
Aspartate aminotransferase.
  
0.982
LDH_PETMA
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. LDH family.
   
 0.956
S4R6I4_PETMA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.952
S4RDK6_PETMA
Glutamic pyruvate transaminase (alanine aminotransferase) 2.
   
 0.945
S4RXU5_PETMA
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.939
S4R485_PETMA
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.934
S4RJM6_PETMA
Tyrosine aminotransferase.
   
 0.933
S4RP83_PETMA
Malate dehydrogenase.
   
 0.932
S4RUP2_PETMA
Aldedh domain-containing protein.
   
 0.930
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.