Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9M9_PETMACyclic nucleotide gated channel beta 1a. (479 aa)    
Predicted Functional Partners:
CALML3
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.973
CALM3
Calmodulin 3; Belongs to the calmodulin family.
   
 0.973
S4RL94_PETMA
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.973
S4RVY4_PETMA
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.923
A3RLS1_PETMA
Cone-like retinal photoreceptor cGMP-phosphodiesterase 6 gamma subunit.
   
  
 0.853
S4RI14_PETMA
Phosphodiesterase 6B, cGMP-specific, rod, beta.
   
 0.843
S4RGF3_PETMA
Arrestin, beta 2a.
   
  
 0.783
S4RPV7_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.775
S4RUK8_PETMA
Guanylate cyclase activator 1B.
   
 0.771
S4RHI5_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.732
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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