STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9M9_PETMACyclic nucleotide gated channel beta 1a. (479 aa)    
Predicted Functional Partners:
CALML3
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.844
CALM3
Calmodulin 3; Belongs to the calmodulin family.
   
 0.844
S4RL94_PETMA
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.844
S4RPV7_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.749
RCVRN-2
Recoverin.
    
 0.699
S4RI14_PETMA
Phosphodiesterase 6B, cGMP-specific, rod, beta.
   
 0.698
S4RRU3_PETMA
Calcium binding protein 1b.
   
 0.697
S4RHI5_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.690
S4RUK8_PETMA
Guanylate cyclase activator 1B.
   
 0.683
RCVRN
Recoverin.
    
 0.673
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.