Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9N8_PETMATransmembrane p24 trafficking protein 4. (176 aa)    
Predicted Functional Partners:
S4REZ2_PETMA
Transmembrane p24 trafficking protein 2.
   
 0.995
S4RXA0_PETMA
Surfeit 4, like.
   
 0.982
S4RIK9_PETMA
Transmembrane p24 trafficking protein 7.
   
 0.938
S4RTT6_PETMA
Transmembrane p24 trafficking protein 3.
   
 0.938
S4R682_PETMA
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.920
S4R6A7_PETMA
Transmembrane p24 trafficking protein 5.
   
 
 0.868
S4RF17_PETMA
Transmembrane p24 trafficking protein 5.
   
 
 0.868
S4RSZ8_PETMA
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.858
S4RBR1_PETMA
N-acetyl-alpha-glucosaminidase.
    
   0.847
S4RFB5_PETMA
N-acetyl-alpha-glucosaminidase.
    
   0.847
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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