STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9P4_PETMAMalic_M domain-containing protein. (144 aa)    
Predicted Functional Partners:
S4RF12_PETMA
Malic enzyme.
 
     0.951
S4RWI8_PETMA
Malic_M domain-containing protein.
 
     0.951
S4RJ25_PETMA
Malate dehydrogenase.
  
 0.857
S4RXU5_PETMA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.844
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
  
 0.830
S4RP83_PETMA
Malate dehydrogenase.
  
 0.827
SUCLG1
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.
  
 
 0.819
S4RDK6_PETMA
Glutamic pyruvate transaminase (alanine aminotransferase) 2.
  
 0.817
S4R4V3_PETMA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.809
S4RJM8_PETMA
Poly [ADP-ribose] polymerase.
  
 0.809
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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