Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9P7_PETMAYKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (205 aa)    
Predicted Functional Partners:
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.998
S4RUR1_PETMA
Synaptosome associated protein 29.
    
 0.997
S4RW00_PETMA
Bet1 golgi vesicular membrane trafficking protein.
   
 0.996
S4REN5_PETMA
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.995
S4RTR2_PETMA
t-SNARE coiled-coil homology domain-containing protein.
    
 0.995
S4RMB2_PETMA
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.989
S4RFD1_PETMA
N-ethylmaleimide-sensitive factor a; Belongs to the AAA ATPase family.
    
 0.984
S4R908_PETMA
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.981
S4RQG7_PETMA
Protein prenyltransferase alpha subunit repeat containing 1.
   
 
 0.980
S4RB81_PETMA
Syntaxin-5_N domain-containing protein.
    
 0.979
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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