Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9P8_PETMAUncharacterized protein. (736 aa)    
Predicted Functional Partners:
S4R9I0_PETMA
Uncharacterized protein.
    
 0.996
S4RMF6_PETMA
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.
    
 0.979
S4RTA5_PETMA
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.
    
 0.979
S4RQ64_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.948
S4R7A1_PETMA
PSI domain-containing protein.
    
 0.945
S4RGT4_PETMA
Uncharacterized protein.
    
 0.945
S4RNR0_PETMA
Plexin_cytopl domain-containing protein.
    
 0.945
S4RKT8_PETMA
Protein kinase domain-containing protein.
    
  0.941
S4R956_PETMA
Uncharacterized protein.
      
 0.885
S4RLH1_PETMA
Ig-like domain-containing protein.
    
 0.820
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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