Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Q2_PETMAUncharacterized protein. (433 aa)    
Predicted Functional Partners:
S4RBK0_PETMA
Uncharacterized protein.
   
 0.927
S4RKS7_PETMA
Protocadherin-related 15b.
   
 0.927
CTNND2
Catenin delta 2.
    
 0.861
S4RC73_PETMA
Catenin (cadherin-associated protein), alpha 1.
    
 0.828
BCL3
BCL3 transcription coactivator.
    
 0.648
CTNNB1
Catenin beta 1.
    
 0.642
CTNNB1-2
Catenin beta 1.
    
 0.642
CTNNB1-3
Catenin beta 1.
    
 0.642
CTNNB1-4
Catenin beta 1.
    
 0.642
S4RUR4_PETMA
LHFPL tetraspan subfamily member 5b.
    
 0.626
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.