Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9Q3_PETMAF-box protein 31. (309 aa)    
Predicted Functional Partners:
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
    
 0.988
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
  0.967
S4RTZ6_PETMA
Cyclin D2, b; Belongs to the cyclin family.
    
 
 0.863
S4RPC2_PETMA
F-box domain-containing protein.
      
 0.756
S4RCD2_PETMA
Cullin-associated and neddylation-dissociated 1.
     
  0.660
FBXO46
F-box protein 46.
      
 0.629
S4R6X4_PETMA
Uncharacterized protein.
      
 0.613
S4RC86_PETMA
Inositol monophosphatase domain containing 1.
      
 0.590
S4RZD1_PETMA
DCN1-like protein.
     
  0.528
S4R7I8_PETMA
Si:ch1073-228j22.2.
     
 0.518
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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