STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF122Ring finger protein 122. (63 aa)    
Predicted Functional Partners:
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.856
UBB
Ubiquitin B.
    
 0.838
S4RV88_PETMA
Mothers against decapentaplegic homolog.
   
 0.766
S4RX81_PETMA
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.734
S4RR10_PETMA
Zinc finger, AN1-type domain 4.
   
 0.733
UBE2N
Ubiquitin conjugating enzyme E2 N.
   
 0.689
S4RDZ2_PETMA
Uncharacterized protein.
   
 0.688
S4R672_PETMA
Relaxin family peptide receptor 2b.
    
 0.670
S4RMY8_PETMA
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.670
S4RPC6_PETMA
Uncharacterized protein.
    
 0.670
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.