Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Q7_PETMAUncharacterized protein. (101 aa)    
Predicted Functional Partners:
S4RJZ9_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.920
S4R4E2_PETMA
SER_THR_PHOSPHATASE domain-containing protein.
    
  0.633
S4RIN4_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.633
S4RT78_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.633
S4R4B6_PETMA
Proteasome activator subunit 3.
      
 0.614
S4RUM8_PETMA
Protein kinase domain-containing protein.
    
  0.603
S4RSV3_PETMA
Pescadillo.
   
 0.543
S4R788_PETMA
Testis expressed 10.
    
 0.524
S4R7C7_PETMA
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.473
S4R7L5_PETMA
GN3L_Grn1 domain-containing protein.
   
  0.471
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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