Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9S8_PETMAUncharacterized protein. (295 aa)    
Predicted Functional Partners:
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
    
 0.991
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.923
S4RK47_PETMA
F-box and leucine-rich repeat protein 5.
     
 0.639
S4RRD7_PETMA
Uncharacterized protein.
      
 0.613
S4RX44_PETMA
SRP72 domain-containing protein.
      
 0.613
S4R9M9_PETMA
Cyclic nucleotide gated channel beta 1a.
      
 0.612
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 
 0.587
S4RLI8_PETMA
BZIP domain-containing protein.
    
  0.554
S4R979_PETMA
Zgc:66475.
   
 0.534
S4RD97_PETMA
ATP-dependent DNA helicase; Belongs to the helicase family.
   
  
 0.534
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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