Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9T3_PETMAUncharacterized protein. (112 aa)    
Predicted Functional Partners:
S4RJM6_PETMA
Tyrosine aminotransferase.
   
 
 0.997
S4R9M4_PETMA
Aspartate aminotransferase.
  
 
 0.982
S4RAL7_PETMA
Aspartate aminotransferase.
  
 
 0.980
S4RQV6_PETMA
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 
 0.968
S4RHD9_PETMA
Uncharacterized protein.
     
 0.923
S4R9W1_PETMA
Cell division cycle and apoptosis regulator 1.
    
 0.865
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
     
 0.856
S4RTJ9_PETMA
Acyl-CoA_dh_N domain-containing protein.
  
 
 0.854
S4RCE8_PETMA
Propionyl-CoA carboxylase subunit alpha.
  
 
 0.808
S4RLJ1_PETMA
Uncharacterized protein.
  
 
 0.808
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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