STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9T3_PETMAUncharacterized protein. (112 aa)    
Predicted Functional Partners:
S4RQV6_PETMA
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 
 0.991
S4RJM6_PETMA
Tyrosine aminotransferase.
   
 
 0.959
S4R9M4_PETMA
Aspartate aminotransferase.
  
 
 0.926
S4RAL7_PETMA
Aspartate aminotransferase.
  
 
 0.918
S4R6I4_PETMA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.906
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
     
 0.900
S4RCE8_PETMA
Propionyl-CoA carboxylase subunit alpha.
  
 
 0.891
S4RLJ1_PETMA
Uncharacterized protein.
  
 
 0.891
S4RVB4_PETMA
Uncharacterized protein.
  
 
 0.891
S4R9W1_PETMA
Cell division cycle and apoptosis regulator 1.
     
 0.889
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.