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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9U4_PETMAOxysterol-binding protein; Belongs to the OSBP family. (741 aa)    
Predicted Functional Partners:
S4RTH1_PETMA
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.904
S4RUS6_PETMA
Motile sperm domain containing 1.
    
 0.776
S4RWF4_PETMA
Uncharacterized protein.
   
 
 0.588
S4RKI4_PETMA
Apoptotic peptidase activating factor 1.
      
 0.481
S4RU61_PETMA
Extended synaptotagmin-like protein 1b.
   
 
 0.453
S4RJY1_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.436
S4R8Y2_PETMA
Uncharacterized protein.
   
  0.423
S4RUF6_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.423
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
   
 
 0.407
S4RI18_PETMA
Pleckstrin 2.
   
  
 0.402
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.