Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9U5_PETMACentromere protein L. (331 aa)    
Predicted Functional Partners:
CENPS-CORT
CENPS-CORT readthrough.
     
 0.927
CENPK
Centromere protein K.
   
 
 0.847
S4RYS4_PETMA
Centromere protein I.
   
 0.768
S4RCA4_PETMA
Cell division cycle 20 homolog.
   
 
  0.619
S4RYI2_PETMA
Serine/threonine-protein kinase PLK.
   
 
  0.560
S4RSZ5_PETMA
BUB3 mitotic checkpoint protein.
     
  0.559
ESPL1
Extra spindle pole bodies like 1, separase.
   
 
  0.553
S4RDL2_PETMA
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.534
S4RJN6_PETMA
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.534
S4RKT1_PETMA
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.534
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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