Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9V1_PETMAGlycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (273 aa)    
Predicted Functional Partners:
S4R857_PETMA
Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.965
S4RDG2_PETMA
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
 
0.903
S4R6K6_PETMA
Gephyrin.
    
 
 0.623
S4REV7_PETMA
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
     0.457
HTR1F
5-hydroxytryptamine receptor 1F; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.447
S4RSK2_PETMA
Neur_chan_LBD domain-containing protein.
  
     0.403
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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