Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9V4_PETMAZgc:153146. (314 aa)    
Predicted Functional Partners:
S4RKH0_PETMA
EF-hand calcium binding domain 1.
    
 
 0.983
S4RTW5_PETMA
IQ motif and ubiquitin domain containing.
   
 
 0.969
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.943
S4R8M9_PETMA
Uncharacterized protein.
    
 
 0.940
S4RLP2_PETMA
Coiled-coil domain containing 173.
   
  0.918
S4RIM5_PETMA
Uncharacterized protein.
   
   0.913
S4R4J4_PETMA
Uncharacterized protein.
   
   0.912
PACRGL
Parkin coregulated like.
   
   0.901
S4RY15_PETMA
Cilia and flagella associated protein 52.
   
   0.898
S4RCP1_PETMA
Uncharacterized protein.
    
  0.892
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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