STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9V4_PETMAZgc:153146. (314 aa)    
Predicted Functional Partners:
S4RMT0_PETMA
Protein kinase domain-containing protein.
    
 0.687
S4R8M9_PETMA
Uncharacterized protein.
   
  
 0.606
S4RKH0_PETMA
EF-hand calcium binding domain 1.
      
 0.596
S4RY75_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.577
S4RTW5_PETMA
IQ motif and ubiquitin domain containing.
      
 0.562
S4RLH3_PETMA
Uncharacterized protein.
    
 
 0.555
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.527
PIDD1
P53-induced death domain protein 1.
    
 0.518
S4RPZ6_PETMA
MRE11 homolog A, double strand break repair nuclease.
    
 0.517
S4RCG0_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.516
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.