Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R9V6_PETMAF-BAR domain-containing protein. (448 aa)    
Predicted Functional Partners:
S4RR09_PETMA
Uncharacterized protein.
   
 0.916
S4RFK8_PETMA
BAR domain-containing protein.
    
 0.902
S4RA81_PETMA
NCK interacting protein with SH3 domain.
    
 
 0.886
S4R7T0_PETMA
WH2 domain-containing protein.
   
 0.820
S4RFJ4_PETMA
WASP like actin nucleation promoting factor.
   
 0.820
S4RNZ0_PETMA
WASP like actin nucleation promoting factor.
   
 0.820
S4RY60_PETMA
Uncharacterized protein.
   
 0.820
S4RQE4_PETMA
F-BAR domain-containing protein.
    
 0.811
S4R897_PETMA
Myosin IEa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.741
S4RFZ1_PETMA
Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.741
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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