STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9W1_PETMACell division cycle and apoptosis regulator 1. (900 aa)    
Predicted Functional Partners:
S4R9T3_PETMA
Uncharacterized protein.
     
 0.889
S4RDS5_PETMA
PRP40 pre-mRNA processing factor 40 homolog A.
   
  0.883
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
     
 0.851
S4R9N7_PETMA
Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.
     
 0.815
S4S043_PETMA
Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.
     
 0.815
S4R6L7_PETMA
Cyclin-dependent kinase 12.
   
 
 0.763
S4RTK7_PETMA
Sirtuin 6.
    
 0.713
S4R790_PETMA
Transcription elongation regulator 1a (CA150).
   
 
  0.689
S4RR24_PETMA
Uncharacterized protein.
   
 
  0.689
S4R4I3_PETMA
Phosphoethanolamine methyltransferase.
   
 
 0.685
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.