Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R9W5_PETMAArginase. (359 aa)    
Predicted Functional Partners:
S4R5F8_PETMA
Argininosuccinate lyase.
     
 0.982
AZIN1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.978
AZIN1-2
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.978
AZIN1-3
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.978
AZIN1-4
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.978
S4RKS5_PETMA
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.952
S4R9W4_PETMA
Nitric oxide synthase 1 (neuronal).
    
 0.938
S4RJ43_PETMA
NOS domain-containing protein.
    
 0.938
S4RQN0_PETMA
Flavodoxin-like domain-containing protein.
    
 0.938
S4REV3_PETMA
Aminoacylase 1.
  
 
 0.923
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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