Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9W7_PETMATafazzin family protein; Belongs to the taffazin family. (111 aa)    
Predicted Functional Partners:
S4RY68_PETMA
Cardiolipin synthase 1.
     
 0.965
S4RQC1_PETMA
Lysocardiolipin acyltransferase 1.
   
 
 0.961
ABHD5
Abhydrolase domain containing 5.
    
 
 0.895
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.888
S4RDZ7_PETMA
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 
 0.881
S4RN99_PETMA
Pumilio RNA-binding family member 1.
   
   0.812
S4RRG2_PETMA
Pumilio RNA-binding family member 2.
   
   0.812
ND2
NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
    
 
 0.792
S4RXS2_PETMA
USP domain-containing protein; Belongs to the peptidase C19 family.
    
   0.697
S4S056_PETMA
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
   
 0.659
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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