Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9X2_PETMAUncharacterized protein. (486 aa)    
Predicted Functional Partners:
S4RE75_PETMA
NARG2_C domain-containing protein.
    
 0.995
S4RXX8_PETMA
ELL associated factor 1.
    
 0.988
S4RDS0_PETMA
MLLT3 super elongation complex subunit.
    
 0.981
S4RWZ7_PETMA
MLLT1 super elongation complex subunit a.
    
 0.981
S4RLA2_PETMA
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
     
  0.961
S4RNT0_PETMA
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.961
S4RU49_PETMA
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.961
S4RJB6_PETMA
Polymerase (RNA) II (DNA directed) polypeptide C.
     
 0.947
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
     
  0.941
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.923
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.