STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9X2_PETMAUncharacterized protein. (486 aa)    
Predicted Functional Partners:
S4RXX8_PETMA
ELL associated factor 1.
    
 0.987
S4RE75_PETMA
NARG2_C domain-containing protein.
    
 0.908
S4RJB6_PETMA
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.904
S4RNT0_PETMA
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.884
S4RU49_PETMA
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.884
S4RDS0_PETMA
MLLT3 super elongation complex subunit.
    
 0.883
S4RWZ7_PETMA
MLLT1 super elongation complex subunit a.
    
 0.883
CCNT2
Cyclin T2; Belongs to the cyclin family.
    
 0.861
S4RQM9_PETMA
Cyclin N-terminal domain-containing protein.
    
 0.861
S4RR50_PETMA
Transcription elongation factor SPT5.
    
 0.861
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.