STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9X4_PETMACarn_acyltransf domain-containing protein. (635 aa)    
Predicted Functional Partners:
S4RAW3_PETMA
Carnitine O-acetyltransferase b.
  
  
 
0.903
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
   
 0.785
S4R8V1_PETMA
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.750
S4R7R6_PETMA
Uncharacterized protein.
   
 0.734
S4RLH8_PETMA
SCP2 domain-containing protein.
   
 0.734
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
   
 0.726
S4RRA2_PETMA
Enoyl-CoA delta isomerase 2.
   
 0.726
S4RQF1_PETMA
Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.676
S4S152_PETMA
Solute carrier family 18 member 3a.
 
 
  
 0.639
S4RJ25_PETMA
Malate dehydrogenase.
   
 
 0.638
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (18%) [HD]