STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Y0_PETMAUncharacterized protein. (105 aa)    
Predicted Functional Partners:
S4RQ02_PETMA
Ras converting CAAX endopeptidase 1a.
   
 0.936
S4RVY9_PETMA
Peptidase_M48 domain-containing protein.
    
 0.934
S4RJE7_PETMA
OMA1 zinc metallopeptidase.
    
 0.881
S4RTS3_PETMA
Riboflavin kinase.
     
 0.866
S4S0L0_PETMA
Uncharacterized protein.
    
  0.848
S4RLG2_PETMA
Rhodanese domain-containing protein.
    
 0.829
S4RS31_PETMA
Si:ch211-161h7.8.
    
 0.829
S4R6G7_PETMA
Tartrate-resistant acid phosphatase type 5.
    
  0.822
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
  
 
  0.822
S4R9H3_PETMA
Cystathionase (cystathionine gamma-lyase), like.
     
 0.818
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.