STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Y3_PETMAPeroxisomal biogenesis factor 11 beta. (253 aa)    
Predicted Functional Partners:
S4RLX5_PETMA
Peroxisomal biogenesis factor 13.
   
 0.950
PEX3
Peroxisomal biogenesis factor 3.
   
 0.912
S4RJV3_PETMA
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.900
PEX14
Peroxisomal biogenesis factor 14.
    
 0.896
PEX14-2
Peroxisomal biogenesis factor 14.
    
 0.896
S4RA28_PETMA
Family with sequence similarity 185 member A.
    
 0.869
S4RCQ9_PETMA
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.825
ABCD1
ATP binding cassette subfamily D member 1.
   
 
 0.820
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.804
S4R6F6_PETMA
Peroxisomal biogenesis factor 6; Belongs to the AAA ATPase family.
    
 0.797
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.