STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Y5_PETMAUncharacterized protein. (122 aa)    
Predicted Functional Partners:
S4RWR1_PETMA
Mitogen-activated protein kinase kinase 7.
    
 0.958
S4RWF9_PETMA
Mitogen-activated protein kinase kinase kinase 21.
 
     0.920
S4RA47_PETMA
Protein kinase domain-containing protein.
 
  
 
 0.904
S4RT18_PETMA
Mitogen-activated protein kinase kinase kinase 9.
  
  
 
0.901
S4RYF6_PETMA
Protein kinase domain-containing protein.
 
      0.900
S4RKJ3_PETMA
Uncharacterized protein.
 
  
   0.788
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.617
S4RCK5_PETMA
Uncharacterized protein.
    
 0.616
S4RTC7_PETMA
Uncharacterized protein.
   
 0.574
TRADD
Tnfrsf1a-associated via death domain.
    
 0.572
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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