STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9Z1_PETMAPax2_C domain-containing protein. (87 aa)    
Predicted Functional Partners:
S4R8Q6_PETMA
PNT domain-containing protein.
   
 
 0.947
S4S1Q3_PETMA
Paired box 9.
 
    
 0.905
Pax1/9b
Pax1/9b.
 
    
 0.902
PPARD
Peroxisome proliferator activated receptor delta.
     
 0.844
S4RTR1_PETMA
Retinoid X receptor, gamma b.
     
 0.821
S4R9C4_PETMA
Uncharacterized protein.
     
 0.817
S4R5F3_PETMA
RunxI domain-containing protein.
    
 0.782
S4R5X9_PETMA
Core-binding factor subunit beta.
     
 0.658
S4RX66_PETMA
LIM homeobox 1b.
    
 
 0.655
S4RNA7_PETMA
ETS domain-containing protein.
    
 
 0.640
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.