Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AARS-2Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (962 aa)    
Predicted Functional Partners:
S4RPZ1_PETMA
Glycyl-tRNA synthetase.
  
 
 0.960
S4R5V3_PETMA
tRNA-synt_1 domain-containing protein.
  
 
 0.959
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
 
 0.910
S4R4M7_PETMA
Uncharacterized protein.
  
 
 0.910
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
  
 0.908
AARS
Alanyl-tRNA synthetase 2, mitochondrial (putative); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
  
  
 
0.903
S4RXF5_PETMA
Aspartyl-tRNA synthetase 2, mitochondrial.
 
  
 0.865
S4R871_PETMA
Uncharacterized protein.
  
 
 0.855
LARS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.852
S4RTM0_PETMA
Uncharacterized protein.
   
 0.813
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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