STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARS-2Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (962 aa)    
Predicted Functional Partners:
S4RPX0_PETMA
APC1_C domain-containing protein.
    
 0.970
S4RTM0_PETMA
Uncharacterized protein.
   
 0.970
S4S0U9_PETMA
Anaphase promoting complex subunit 10.
    
 0.968
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 0.960
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
 
 0.943
S4R4M7_PETMA
Uncharacterized protein.
  
 
 0.943
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
 
 0.942
S4RZ90_PETMA
Anaphase promoting complex subunit 13.
    
 0.940
S4R868_PETMA
Uncharacterized protein.
   
 0.906
S4RFF5_PETMA
Anaphase promoting complex subunit 4.
   
 0.906
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.