Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC112Coiled-coil domain containing 112. (474 aa)    
Predicted Functional Partners:
S4RJU4_PETMA
Testis expressed 9.
    
 
 0.938
S4RWR2_PETMA
Protein geranylgeranyltransferase type I, beta subunit.
 
  
 
 0.885
FEM1B
Fem-1 homolog B.
   
 0.561
S4S199_PETMA
Fem-1 homolog c (C. elegans).
   
 0.560
S4R848_PETMA
Uncharacterized protein.
    
  0.515
S4RF48_PETMA
Growth arrest-specific 7a.
    
 0.502
S4RM85_PETMA
ARID domain-containing protein.
    
 0.502
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
    
 0.502
AP3B2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 
 0.486
S4RPH1_PETMA
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
     
 0.482
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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