STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB1Serpin family B member 1; Belongs to the serpin family. (341 aa)    
Predicted Functional Partners:
S4REY0_PETMA
Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.
  
 0.903
S4RD89_PETMA
Coagulation factor X.
  
 0.742
S4RWE9_PETMA
Uncharacterized protein.
  
 0.742
S4RYM8_PETMA
Coagulation factor X.
  
 0.742
S4RY75_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 0.682
S4REC5_PETMA
Uncharacterized protein.
    
 0.628
S4REP7_PETMA
LAM_G_DOMAIN domain-containing protein.
    
 0.628
S4REX1_PETMA
Uncharacterized protein.
    
 0.628
S4RJS5_PETMA
Uncharacterized protein.
    
 0.628
FIBB_PETMA
Fibrinogen beta chain; Fibrinogen has a double function: yielding monomers that polymerize into fibrin and acting as a cofactor in platelet aggregation.
   
 0.595
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.