Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RAE4_PETMAUncharacterized protein. (195 aa)    
Predicted Functional Partners:
S4RV41_PETMA
PLAT domain-containing protein.
 
  
   0.909
S4RSQ9_PETMA
Uncharacterized protein.
 
  
   0.908
S4RCC2_PETMA
Chromo domain-containing protein.
    
 
 0.822
POT1
Protection of telomeres 1.
    
 
 0.816
S4RNF3_PETMA
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.734
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.694
S4RTQ9_PETMA
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.639
S4RWW4_PETMA
CDC73_N domain-containing protein.
   
 0.639
S4RGL5_PETMA
Cyclin-dependent kinase 2 interacting protein.
   
 0.617
S4RN13_PETMA
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.617
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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