STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RAE4_PETMAUncharacterized protein. (195 aa)    
Predicted Functional Partners:
S4RSQ9_PETMA
Uncharacterized protein.
 
  
 
 0.917
S4RV41_PETMA
PLAT domain-containing protein.
 
  
 
 0.917
POT1
Protection of telomeres 1.
    
 
 0.802
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.781
S4R4F8_PETMA
Uncharacterized protein.
   
 0.757
S4R9T9_PETMA
PID domain-containing protein.
   
 0.757
S4RGL5_PETMA
Cyclin-dependent kinase 2 interacting protein.
    
 0.734
S4RN13_PETMA
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.734
S4RTQ9_PETMA
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.718
S4RWW4_PETMA
CDC73_N domain-containing protein.
    
 0.718
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.