Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
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[Homology]
Score
TGFB2Transforming growth factor, beta 2. (135 aa)    
Predicted Functional Partners:
S4RWP5_PETMA
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.996
S4RF30_PETMA
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.966
S4RL98_PETMA
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.966
S4RP92_PETMA
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.966
S4R844_PETMA
Left-right determination factor.
     
 0.947
S4S1S9_PETMA
TGFb_propeptide domain-containing protein.
 
     0.918
S4RS40_PETMA
Inhibin subunit beta B.
     
0.902
S4RMZ1_PETMA
TGF_BETA_2 domain-containing protein.
  
  
 
0.901
S4RBK6_PETMA
Inhibin subunit beta Ab.
     
 
0.900
A5HHM3_PETMA
Variable lymphocyte receptor B cassette.
     
  0.900
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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