Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RAG0_PETMAGST N-terminal domain-containing protein. (82 aa)    
Predicted Functional Partners:
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.619
S4RB93_PETMA
Solute carrier family 17 member 6b.
      
 0.598
S4RXJ6_PETMA
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa.
      
 0.594
S4RQ20_PETMA
Solute carrier family 52 member 3.
      
 0.580
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
   0.558
VIT
Vitrin.
     
 0.536
S4RE10_PETMA
Lymphocyte cytosolic protein 1 (L-plastin).
   
  0.522
S4RS18_PETMA
FERM domain-containing protein.
   
 0.512
S4R9D0_PETMA
PL48 domain-containing protein.
     
 0.507
S4R911_PETMA
Glutaredoxin and cysteine rich domain containing 1 a.
     
 0.494
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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