STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RAI7_PETMAUncharacterized protein. (561 aa)    
Predicted Functional Partners:
S4RQE0_PETMA
Retinoblastoma binding protein 5.
    
 0.993
S4REI0_PETMA
Uncharacterized protein.
    
 0.991
S4RZZ0_PETMA
Uncharacterized protein.
 
 
 0.983
S4RHG8_PETMA
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.982
S4RRC4_PETMA
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.982
S4RJD3_PETMA
E1A binding protein p300 a.
   
 0.971
S4RKL5_PETMA
DnaJ heat shock protein family (Hsp40) member B1b.
    
 0.961
S4RP24_PETMA
WD repeat and SOCS box containing 1.
   
 0.952
S4R6I8_PETMA
RRM domain-containing protein.
    
 
 0.947
S4RPR0_PETMA
Folliculin interacting protein 1.
    
 0.922
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.