Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RAL6_PETMAPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (264 aa)    
Predicted Functional Partners:
S4RUM0_PETMA
Uncharacterized protein.
 
  
   0.638
S4RQD7_PETMA
Uncharacterized protein.
 
      0.607
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.601
S4RE54_PETMA
Uncharacterized protein.
 
 
   0.582
S4RA89_PETMA
Uncharacterized protein.
 
      0.551
S4RVP9_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
0.516
S4RMK2_PETMA
Uncharacterized protein.
    
 0.504
S4RVX9_PETMA
WD repeat domain 90.
    
 0.504
S4RWQ5_PETMA
Peptidase S1 domain-containing protein.
  
 
0.490
S4R9Q9_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
  0.450
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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