Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RAR1_PETMASodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (1744 aa)    
Predicted Functional Partners:
S4RM36_PETMA
Uncharacterized protein.
   
 0.908
S4RXU9_PETMA
Uncharacterized protein.
 
    
0.665
IFT122
Intraflagellar transport 122.
   
  0.589
S4RE36_PETMA
GuKc domain-containing protein.
   
 0.578
S4RW72_PETMA
SH3 domain-containing protein.
   
 0.578
S4RT27_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.575
CALML3
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.564
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 
 0.564
S4RL94_PETMA
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.564
S4RZK2_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.536
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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