STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RAR6_PETMACalponin-homology (CH) domain-containing protein. (176 aa)    
Predicted Functional Partners:
S4REL5_PETMA
Uncharacterized protein.
    
 0.829
S4RM25_PETMA
Ciliogenesis associated TTC17 interacting protein.
   
  0.615
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.604
S4RJY2_PETMA
SCA7 domain-containing protein.
    
 0.597
S4REE3_PETMA
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.578
S4R481_PETMA
K(lysine) acetyltransferase 2B.
    
 0.560
S4R685_PETMA
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.551
CFAP65
Cilia and flagella associated protein 65.
   
  0.531
S4RR09_PETMA
Uncharacterized protein.
    
 0.518
S4REC5_PETMA
Uncharacterized protein.
    
 0.516
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.